Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816181.1_cds_XP_016498661.1_12665
CDS Infomation

[gene=LOC107817367] [db_xref=GeneID:107817367] [protein=tubby-like F-box protein 5] [protein_id=XP_016498661.1] [location=complement(join(101605..102274,102553..102682,103017..103104,103202..103552))] [gbkey=CDS]
Sequence

ATGTCATTCAAGAGCTTTGTTCGTGAGTTGAGGGAGATGAAAGATGGGATAGGGAATATA
TCAAGGAGGGGAGCAGAAAGAAAGCAGCATTGGAGCAACAGAACCCGGGCACATATTGTC
CCTGATGTGGCCCTCTCTGATCCCATTGAACAAGGGCAATGGGCAAATTTACCACCAGAA
CTTCTTTTGGATATCATCCGCAGGGTTGAAGAGAGTGAGGCATCATGGCCTGCTCGTTCT
GTGATTGTCTTTTGCGCATCTGTTTGCAAATCATGGAGGGAAATTACCAAGGAGATTGTT
AAGACCCCTGAGGAATGTGGTAGGCTTACCTTTCCCATTTCACTGAAGCAGCCGGGTCCC
CGTGAATCCCCAATCCAGTGTTTTATCAAACGGGACAGAGCTAATTCAGTTTATCGCCTC
TACTTTGGCATGACTCCATCTGAGGATGAGAGGGATAAACTATTATTGGCTGCCAAAAAG
ATCAGAAGGGCAACAAGCACAGACTTTGTAATTTCATTGGTTGCAGATGATTTTTCTCGG
GCTAGCAATACATATGCTGGCAAACTGAGGTCTAACTTTCTTGGAACCAAGTTCTCCATA
TATGATAGCCAACCTCCAAGTGATGCAGCTATTCAACGACATGGTCGACTTAGTCGGAGA
TTTCATGCGAAGCAAGTTTCTCCGAGAGTACCTGCGTGCAACTACAAAGTAGCTACCATC
TCCTATGAACTCAATGTTCTTCGTACAAGAGGGCCTAGGAGAATGCATTGTCCCATGCAC
TCCATCCCTCTCTCTTCAATCCAGGAGGGAGGCAGTGCTCCAACACCTACATCATTCCCA
CAATCGTTTGACGAGAAGACATTTTCTGCACCACTCTCAAAAGCAAAGGAGTCAGCTATA
GATATCAACTCCTCTGGCTTTTCAAGGTCAGCAGTGACAGTGACTTCTCAAGAGCTGCTT
GTGCTAAAAAACAAGGCTCCTAGATGGCATGAGCAATTGCAATGCTGGTGCTTAAATTTT
AAAGGCCGTGTTACAGTGGCTTCTGTAAAAAACTTTCAGCTAGTGGCAGCAGTTGATCCT
TCTCACAATATACCAGTAGCAGAACAAGAGAAAGTAATTCTACAGTTCGGAAAAATTGGA
AAAGACATCTTCACAATGGACTACCGCTACCCACTTTCTGCTTTCCAAGCTTTTGCGATC
TGCTTGAGCAGCTTTGACACGAAACCAGCCTGTGAATGA

Peptide Sequence

PEP ID

XP_016498661.1
PEP Infomation

PREDICTED: tubby-like F-box protein 5 [Nicotiana tabacum]
Sequence

MSFKSFVRELREMKDGIGNISRRGAERKQHWSNRTRAHIVPDVALSDPIEQGQWANLPPE
LLLDIIRRVEESEASWPARSVIVFCASVCKSWREITKEIVKTPEECGRLTFPISLKQPGP
RESPIQCFIKRDRANSVYRLYFGMTPSEDERDKLLLAAKKIRRATSTDFVISLVADDFSR
ASNTYAGKLRSNFLGTKFSIYDSQPPSDAAIQRHGRLSRRFHAKQVSPRVPACNYKVATI
SYELNVLRTRGPRRMHCPMHSIPLSSIQEGGSAPTPTSFPQSFDEKTFSAPLSKAKESAI
DINSSGFSRSAVTVTSQELLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVDP
SHNIPVAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE

Transcript Sequence

Gene sequence data has not been registered.